CDS

Accession Number TCMCG027C13814
gbkey CDS
Protein Id XP_018860481.2
Location join(9638821..9638889,9639078..9639197,9639307..9639464,9640489..9640533,9640827..9640905,9641026..9641099,9642139..9642245,9645981..9646139,9651751..9651954,9652354..9652570,9652681..9652755,9652875..9653224,9653399..9653591,9653726..9653978,9654067..9654403,9654719..9654899,9655025..9655165,9655310..9655571,9655713..9656153,9656550..9657013,9657281..9657417,9657503..9657684,9657775..9658167,9658409..9658534,9658958..9659023,9659109..9660922,9661056..9661335,9667463..9667696,9668643..9669146,9669293..9669425,9669662..9669936)
Gene LOC109022127
GeneID 109022127
Organism Juglans regia

Protein

Length 2690aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA350852
db_source XM_019004936.2
Definition small subunit processome component 20 homolog [Juglans regia]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGATGTCGCATGCTCAGGCTGTGAAGTCCCTCAACAAATCCCCGGGGCGCCGCCGTTTTGTCTTCAAGACGTTCTCTCAGAGGGTAGGAGAGATAGAAATCGATGTTTACAGAAGTCTTGACGAAGTGAAACCCGAGCCAGCAGAGGGCTCCTTTTTTCGGGACTGCCTCATAGAATGGAGGGAATTGAATACTGCTGAGGATTTTATTTCATTTTATGTGGAAATAATGCCCTTGGTACAAACATTACCTTTGGTTCTATTGCACAAGGAATTAATAGTGTCGAAACTTCTCTCAAGTTTACATATGAAAGCAAGGCTATCTCTGGAGCCTATTCTTAGGTTAATTGCTGCTCTATCTAGAGATCTGTTGGTGGATTTTATCCCCTTTCTGCCGAGGATTGCTGATTCTTTAGCGTCTCTCCTACAAAGTGGTGCTGATAGGGAGCCAGAGATTATCGAACAGATATTTATATCGTGGTCATATATTATGATGTATTTGCAGAAGTATTTGATACGAGACCTTGTTTATCTGCTCAAGGTGACGGTAAAACTACGATTTTATCCCAAGGATTATGTTCAAGAATTTATAGCAGAGGCATTATCATTCTTGCTTAGGAATGCGCCAGATGAGCAGTTGCAGTATGGTATTAAAAGGATAATGAGTGAAGTTGTGAAGAAACCGTTGCCTACAAGAAAACTTGGTGTCAGTGCTTTACTATGTTATGTCATGAGAGGGGCCTCATCAAGGTTCCATTCAAGAGCAGAACGAGTATCGCGGCTATTGATGGACAGTGCTATCTTGGGTTCAGAGGCTGTTCTTGAAGTTGTTATTTCTGCTTTTCAAAGACTCTGTGAGGATATAGAGGCAAAGGAGTTGGATTTTATGTTGAAATACTTATATAAAAAAATTACTAACTGTGTAATTGGTGGATCCATTTTGCATTTAAGTAACCTCCTGTCGCTACTTATTTCCATCGTTCAGATTCATAACGGGCAAATGGTTTATGATTACCAGTCATTGCTTGAACATGCGGGGTTTCTTATGCAAAATATTGTCATGTCTTCTGGCATTATGAAGGCAGAGAAGCATCAAACAGAGGCCGTTGATAAGATTCTGGAATTGATGTTATGTATTCTGAATGGCCTCCACAATAAAAATAACATGCCAGCCATCTCTGACTGTTCATTGCAGTGGGCTCCTGTATTTAGGCTAAGGAACTCAAGCTTGCTGAATTTTATTAGAGAACTACTACAAAAGGACCCTTGCATATTATATATTTTCAGAGTAAACATCTTGAGTGCGTTGAGTGATTTGATAGAGACTTCAAAAGAAGAGGTTTTATTTCTATTACTGTCCTTTTGTGAAATAATGGAAGCAAAAGTGCAAGGGTCCAACTTCTCAGGCAGCACATTTGGAGAAGTGTCTTCAAAGATTCAGAGTTTTTTGCAGGAAGCTATCTGCTATTGGATTGGGGCAATAAATAATATTGTGCATGGGGATCCATCATGTAGTCATATTCATGAGACTGAGTTAGCTTTGCTGTGGGGAATGATTAGCTGCTATCCCCGTATGATTGATATCCCTGAGATGTCATCCTATTTAATAGATTTGATTGATGCACTTGATCGGCTACTGATGATTGAAGCAGGCTCCGTAGCAGGTCTTCCTAAACAAACATGGCAAAGCGTAATTGGTGCTGCTTTGAGTTCTTATAACAAATCACGTCATGGTAAAGAATCCCAGCCTGAAGAGACAAGCAAATTTTTGTATCTGGCAAAAAAATACATATCATCTGCACAAGTATTGTCTGCTGTAGCTGATTATTTGGATATTGTCTATGGGCCTACAGTGGAAGCACACAGTAGCAATAGGAAGTATCATCCAGAACTTTCTGTGGAGAAGGCTGTGGATGCAGTAATGATATTTGCTGATAATTTGCGCGACTCTAACAAGGGGTTACGCTTATCAACTCTTAGAATATTGTGCCACTATGAACCTCTGAGATCTGTAGATTCTACAAATGATCAAGCAGTTGGGAAGAAAACAAAATCTGAAGTTGCTCAGGGATCCCATGTGGATGGTCAGGGCATTAATGTTCTCCATTTACTTCTCTCAATCGAGGAAACTTCTCTTTCAATTTCTACAAGCCGGAAAGTTATCCTATGGATTTCCAGAATACAGATGGGTCTTCCTGCTGGCAGAGTACCTCGAGCCTATGTGCCCCTTGTCTTAAATGGGATAATTGGTGTATTGAATAACCGCTTTAGCTATCTTTGGAATCCGGCATTGGAATGCCTTGCAGTTTTGTTGAGCCAGCATATTCAAGTTGTATGGGATGAATTTATTTCTTGTCTTGAGCAGTACCAATCGATATTTCATACATCTAAAGAACAAGACCGGGGGAAGTCTAAGTTACATGATGAGTTAAGTGATCTTGTACAGAATTTTTATTCTTTTGTTACTCCGGAATCAGATAGCACTCCATATGCAACAGTATTATCCTTGTTGCTCCAATCCTTGCAAAAGATTCCAAATGTTGTTGAATCCCATTCTCAACAGTTTATGTCTTTGTTCTTAAAGTTTCTGGGCTATAATCTCGATGATCTTATAAGTGTGGGATTATTCGATTCACGTGCTTGTAAAGGCAGAGAGTGGAAGGGTGTCCTTAAGGAATGGTTAAACTTGCTGAAAATAATGCGCAACCCTAGGTCTTTTTATCAGAGTCAATTTCTTAGAGAAGTTCTGCAAAATAGGCTTCTGGATGAAAATGATGCTGAAATACAGATGAAGGTTCTTGATTGCCTGTTAATTTGGAAGGAGGATTTCTTGCTTCCCTATGATCAGCATCTGAGGAACTTGATTAGTGTTAGATATCTGCGAGAAGAACTGACTACTTGGAGTTTGTCAAAAGAATCTAATTTAATTGAAGAACAGCACAGACCTTATGTTGTGCCTATAGTTATCCGCCTTCTAATGCCAAAAGTTAGGAAATTGAAGACACTTGCCTCTCGAAAGAATGCAAGTGTTCATCACAGAAAGGCAGTGCTTGGTTTCATTGCTGAACTTGATGTTTTGGAGCTTCCACTTTTCTTCGCATTGTTGATAAAGCCATTGCAAATTAGTTCTGAAGATACTGATAGTTCACCCGAAAATTCTATGGATCAATTTCAAGGATTTAGTTTCTTAAAGTATTTCACCGTGGATAATATCACAGCCCTGTCTTGGAAGAAGCGATACGGTTTTATGCATGTGATTGAAGATATCCTAGGAGTTTTTGATGAATTCCACATCAGACCTTTTCTTGATCTATTAATGGGATGTGTTGTTCGGGTATTGGGAAGCTGCACATCAAGTATTGACGCTGCAAAGTGCGATGGATTATCCTCACGCGATGATCATTCTGGTGCTGACCTAACTTTATTCAATAAAGACAGTGCACCAGCAAGTCATGTCACGACAAGCAACACTGTGAAGCAGTTCAAAGATTTAAGGTCTCTATGCCTGAAAATCATCTCTCTTTTCCTTGACAAGTATGAAGATTACGAATTTGGTTGTGAGTTCTGGGACCTATTCTTTACATCTGTGAAACCTTTAGTTGATGGTTTCAAACAGGAAGGTTCCAGCAGTGAGAAACCAAGTTCGCTGTTCTCTTGCTTTGTAGCTATGAGTAGAAGCCACAGGCTTGTATCACTCTTGAGTAGGGAAAAGAATCTTGTTCGTGATATATTTTCAATGCTGAGTATTAAGTCAGCTTCTGAAGCTATTGTCTCATGTGTTCTTAAGTTCGTTGAGAACCTGTTGAATCTTGATAGTGAGTTGGGTGATGAAGATGCTAGTACAAAAAGAGTTTTACTTCCAAACCTGGAGGCACTTATCTGCAGCTTGCATTGCCTTTTTCAAAGTGATAGTGCAACAAAGAGGAAATTGGTCAAATGTCCTGGGGAGAGGGACATAAGAATTTTCAAGTTATTATCGAAGTATATAAAGGACCCGTTGCTAGCAAGAAAATTTGTAGATGTTTTGCTCCCATTCGTAGCAAAGAAAGCTAAAGTTACTCATCTGTGTTCTGAAGCTGTGCAAGTCATTCAAGAAATTGTTCCAGCGTTAGGAAGCGACAGTACTAAAAAGGTTTTGACGGCAGTTTCCCCCCTACTTGCTTCGGTTGAATTGGAGATGCGGCTGTCTATTTGTCATCTTCTTGATTCTCTTGCGGAAGCTGATCCTACTATCCTGTCCATGGCAAAACTTGTTCGTGACTTGAACGCAACTTCTGCTGCTGAATTGGGTAGCCTTGATTATGACACTATAATAAATGCTTATGAAAAGATTTGCGTCAATTTCTTCTATACTATTCATGAGGATCATGCATTGGTCATTTTATCACATTGTGTATATGACATGTCTTCTGAAGAATTGATCTTAAGGCATAGTGCTTATAGGTCATTGCTCTCGTTTGTTGAATTTTCTGCCCTGATTCTTTGCCAAGATGGAAAAGGTCAGCAAGAAATGACTTCTAAGTTGATTATGCATGATAATGGTTGTTGGACAAGAGCATCTATTCAGCGTATCATAAACAAGTTCCTTTTGAAACATATGGGGGTTACTTTGAGCAGAGAAACTACTGTCAACAAGGAATGGATAGATTTACTACGAGAAATGGTGTTGAAACTTCCAGAAGTAGAAAATCTTAATTCATTGAGGGCTCTGTGCAGTAAAGATGCTGAAGTCGATTTTTTCAACAATATTATTCATTTACAAAGACACAGGAGAGCAAGGGCATTGTCTCGTTTTAGAAATGTTATCAGTACAGTCAACATGTCAGAGGGAATCATAAATAAAGTCTTCGTGCCTCTCTTTTTTAGTATGTTGTTTGATGGACAAGAAGGAAAAGGAGAAAATGTTAGAGCTGCATGCATAGAGGCCCTAGGTTCAATTTCTGGTCATGTGGAATGGAATTCATACTATGGATTATTAGTTAGATGCCTTCAAGGGGTGACGAAGAATCCTGACAAGCAAAAGCTCTTTTTGAGACTGACTTGCTCTATATTGGACAATTTTCATTTTTCAGAAATTAGTAACAGCCAAAAAGCGAATGAATCCTTGGAGAATGCTACTGTTGATGGGACCATTAGTAGGGGTTCTTCTGCTATTTTACAGGAGTGCAGTACTTCTACTATGGTAACTGAGATACAGGCATCCCTTAGTAAAACAGTGCTCCCAAAGATGCAGAAGCTACTGAATTCTGATTCTGATAAGGTCAATGTGAACATCAGTTTGGCTGCTCTGAAACTACTAAAATTACTTCCTGAGGACATAATGGACTCATTGCTTCCAAGTATCATTCATCGCATTTCAAACTTCTTAAAGAATCGTTTGGAAAGCATACGTGATGAAGCTAGGTCTGCTTTGGCTGCCTGTTTGAAGGAGCTTGGGCTGGAATACCTGCAGTTTATTGTCAGGGTCTTGCGAGCTACCTTGAAACGAGGATACGAGCTGCATGTATTGGGTTATACACTCAATTTCATCTTGTCCAAGTCTCTTTTAGTTCCTGTTAGTGGGAAATTGGATTACTGTTTGGAAGATCTTCTCTCTGTAGTAGAGAATGATATTCTTGGAGATGTTGCTGAGCAAAAAGAGGTGGAAAAGATTGCTTCAAAAATGAAAGAAACTAAGACGCGAAAATCGATGAAAACCTTGGAATTGATAGCCGAAAGCGTAACATTCAAAACCCATGCCTTGAAGCTTCTTTCACCTGTTACAACACATTTGCAAAAGCAGCTGACACCAAAAGTTAAAACTGAATTGGAAAGGATGTTAAATCACATAGCTGTTGGTATTGATCGTAATCCATCTGTAGATGAGACTGGGCTTTTCATCTTTTTATATGGCCTTATTGAAGATGGTATTAAAGACGAAAATGGTCAGGGTGAACATTCATTAGTGACAGAGGCAAAGAAACATCATAGAAATGACTCTCGTGGAAAAAGAATAACTTCGGGCCGGATTCTCAATGTATCTTCTCATCTTATTATTGTGTTTGCTCTCAGGATATTGCACAAACGTATCAAAAGTTTGAAACTGGGAAAATGTGAACACGGGTTATCAATGCTCGATCCTTTTGTCATGCTTCTTGTCAACTGCCTGGATTCTAAGTATGAAGATATTTTATCTGCATCCCTTAGTTGCCTCACTCCATTGGTAAGGCTGCCTTTACCATCCCTTGAATCCCAAGCTGATAAAATAAAGGAAGCAGTCTTGGCTATTGCACAGAATTCGGTAACTTCCAGCAGTCTTCTAATGCAGTCATGTCTGAGATTGTTGGCTGTGCTTCTACGGAGCACCAGAATCACCCTTTCATCAGATCAGTTACACCATTTAATTCAGCTTCCCCTGTTTGTTGATATTGAAAAAAATCCTTCTAATCTTGCCCTTTCACTTTTAAAGGCAATTGTTAGCCGCAAGCTTGTTGTTGCTGAGATATATGATCTTGTAACTCAAGTTGGTGAATTGATGGTGACTAGTCAAGTGGATTCAATTCGCAAGAAATGCAGTCAAATCTTATTGCAATTTTTACTTGATTATCAGCTTTCTGTGAAACGTCTGCAGCAACATCTAGATTTTCTGCTTTCAAATCTAAGATATGAGCATTCAACTGGAAGAGAAGCTGTGCTTGAAATGCTTCATGCAATCATTGTCAAATTTCCAAGAAAAAATGTGGATGAGCAATCACAGACGTTATTTGTACATTTGGTGGTTTGCTTAGCCAATGATCATGATAGTAGGGTTCGTTCCATGACTGGGGCAGCTATAAAGAAGCTCATTGGGTGCGTAAGCTCACATTCACTCCATTCAATTCTTGAGTACACATTATCTTGGTATTCAGAAGAGACACAGCAACTGTGGAGTGCTGCTGCACAGGTCCTGGGATTTCTGGTTGAGGTAATGAAGAAAGGATTTGAAAGACATGTTAATAGAGTATTGTCGGTGACAAGAAAAAGTTTGCAGTCTGCCATTGGTGCTGTCACCTGTAGGCAACTAGATTTCTCTGAGGAGCCTACTGTTGCTTTCTGGAGGGAGGCATACTATTCCCTTGTTATGCTGGAGAAGATGCTTCATCAGTTCCCTGATTTGTGCTTTCAAAGTGATCTTGAGGATATTTGGGAGGCAATCTGTGAGTTGCTTTTGCACCCACACATGTGGTTACGCCACATATCCAATCGCCTGATAGCCTTGTACTTTGCCAGTGCAATAGAAGCACCCAAAGAAAATGAAGAAAAATCATTACGAGCTTATTTTCTTATGAAGCCAAGTAGACTTTTTATGATAGCTGTTTCCCTCTGCTGCCAACTGAAGACACAACTCGATGATTCTTCCACGGACCTTATAACACAAAATCTTGTCTTCACGATTTGTGGAATGAATTCTTTGATGGCACAGATGGAGTTCTGGTCTACCCTTGAACAGCATGAGCAAGTCCGTTTTCTTGAAGCTTTCCAACTGCTGGATTCAAGAAAGGGGAAAAGCCTCTTTTTGTCTCTTACATCTGGTGTAAGTTATCAAGAGGATCCTGGCCAATCCAACGATATCCGACATGCAATTGTTTCTTATTTGCTCAAAAGAATGGGAAAAATTGCCCTTCAGATGGAGGCTGTTCAGATGAAAATTATATTCAATTGTTTTTCAAAAATATCATCACAAATCAGTCGGGACGATTGCCTACATTATGTACCCGAAATCCTACTGCCCCTATATAAAGTTTGTGAAGGATTTTCTGGGAAAGTGATCCCTGATGACATAAAGCAATTGGCAGAAGAAGTTCGTGAAACAATAAAGAATACTGTAGGCATCCAAAACTTCGTACAAGCGTACAGCGAGATCAGGAAGAATCTCAAGGCGAAACGGGACAAGAGAAGACAGGAAGAAAAGGTAATGGCTGTTGTCAATCCAATGCGCAATGCCAAGAGGAAGTTAAGGATTGCTGCTAAGCATCGTGCCAACAAGAAAAGGAAGATAATGACAATGAAAATGGGGAGATGGGTTCACCAGAAACAGAGGACGATGTAA
Protein:  
MATMSHAQAVKSLNKSPGRRRFVFKTFSQRVGEIEIDVYRSLDEVKPEPAEGSFFRDCLIEWRELNTAEDFISFYVEIMPLVQTLPLVLLHKELIVSKLLSSLHMKARLSLEPILRLIAALSRDLLVDFIPFLPRIADSLASLLQSGADREPEIIEQIFISWSYIMMYLQKYLIRDLVYLLKVTVKLRFYPKDYVQEFIAEALSFLLRNAPDEQLQYGIKRIMSEVVKKPLPTRKLGVSALLCYVMRGASSRFHSRAERVSRLLMDSAILGSEAVLEVVISAFQRLCEDIEAKELDFMLKYLYKKITNCVIGGSILHLSNLLSLLISIVQIHNGQMVYDYQSLLEHAGFLMQNIVMSSGIMKAEKHQTEAVDKILELMLCILNGLHNKNNMPAISDCSLQWAPVFRLRNSSLLNFIRELLQKDPCILYIFRVNILSALSDLIETSKEEVLFLLLSFCEIMEAKVQGSNFSGSTFGEVSSKIQSFLQEAICYWIGAINNIVHGDPSCSHIHETELALLWGMISCYPRMIDIPEMSSYLIDLIDALDRLLMIEAGSVAGLPKQTWQSVIGAALSSYNKSRHGKESQPEETSKFLYLAKKYISSAQVLSAVADYLDIVYGPTVEAHSSNRKYHPELSVEKAVDAVMIFADNLRDSNKGLRLSTLRILCHYEPLRSVDSTNDQAVGKKTKSEVAQGSHVDGQGINVLHLLLSIEETSLSISTSRKVILWISRIQMGLPAGRVPRAYVPLVLNGIIGVLNNRFSYLWNPALECLAVLLSQHIQVVWDEFISCLEQYQSIFHTSKEQDRGKSKLHDELSDLVQNFYSFVTPESDSTPYATVLSLLLQSLQKIPNVVESHSQQFMSLFLKFLGYNLDDLISVGLFDSRACKGREWKGVLKEWLNLLKIMRNPRSFYQSQFLREVLQNRLLDENDAEIQMKVLDCLLIWKEDFLLPYDQHLRNLISVRYLREELTTWSLSKESNLIEEQHRPYVVPIVIRLLMPKVRKLKTLASRKNASVHHRKAVLGFIAELDVLELPLFFALLIKPLQISSEDTDSSPENSMDQFQGFSFLKYFTVDNITALSWKKRYGFMHVIEDILGVFDEFHIRPFLDLLMGCVVRVLGSCTSSIDAAKCDGLSSRDDHSGADLTLFNKDSAPASHVTTSNTVKQFKDLRSLCLKIISLFLDKYEDYEFGCEFWDLFFTSVKPLVDGFKQEGSSSEKPSSLFSCFVAMSRSHRLVSLLSREKNLVRDIFSMLSIKSASEAIVSCVLKFVENLLNLDSELGDEDASTKRVLLPNLEALICSLHCLFQSDSATKRKLVKCPGERDIRIFKLLSKYIKDPLLARKFVDVLLPFVAKKAKVTHLCSEAVQVIQEIVPALGSDSTKKVLTAVSPLLASVELEMRLSICHLLDSLAEADPTILSMAKLVRDLNATSAAELGSLDYDTIINAYEKICVNFFYTIHEDHALVILSHCVYDMSSEELILRHSAYRSLLSFVEFSALILCQDGKGQQEMTSKLIMHDNGCWTRASIQRIINKFLLKHMGVTLSRETTVNKEWIDLLREMVLKLPEVENLNSLRALCSKDAEVDFFNNIIHLQRHRRARALSRFRNVISTVNMSEGIINKVFVPLFFSMLFDGQEGKGENVRAACIEALGSISGHVEWNSYYGLLVRCLQGVTKNPDKQKLFLRLTCSILDNFHFSEISNSQKANESLENATVDGTISRGSSAILQECSTSTMVTEIQASLSKTVLPKMQKLLNSDSDKVNVNISLAALKLLKLLPEDIMDSLLPSIIHRISNFLKNRLESIRDEARSALAACLKELGLEYLQFIVRVLRATLKRGYELHVLGYTLNFILSKSLLVPVSGKLDYCLEDLLSVVENDILGDVAEQKEVEKIASKMKETKTRKSMKTLELIAESVTFKTHALKLLSPVTTHLQKQLTPKVKTELERMLNHIAVGIDRNPSVDETGLFIFLYGLIEDGIKDENGQGEHSLVTEAKKHHRNDSRGKRITSGRILNVSSHLIIVFALRILHKRIKSLKLGKCEHGLSMLDPFVMLLVNCLDSKYEDILSASLSCLTPLVRLPLPSLESQADKIKEAVLAIAQNSVTSSSLLMQSCLRLLAVLLRSTRITLSSDQLHHLIQLPLFVDIEKNPSNLALSLLKAIVSRKLVVAEIYDLVTQVGELMVTSQVDSIRKKCSQILLQFLLDYQLSVKRLQQHLDFLLSNLRYEHSTGREAVLEMLHAIIVKFPRKNVDEQSQTLFVHLVVCLANDHDSRVRSMTGAAIKKLIGCVSSHSLHSILEYTLSWYSEETQQLWSAAAQVLGFLVEVMKKGFERHVNRVLSVTRKSLQSAIGAVTCRQLDFSEEPTVAFWREAYYSLVMLEKMLHQFPDLCFQSDLEDIWEAICELLLHPHMWLRHISNRLIALYFASAIEAPKENEEKSLRAYFLMKPSRLFMIAVSLCCQLKTQLDDSSTDLITQNLVFTICGMNSLMAQMEFWSTLEQHEQVRFLEAFQLLDSRKGKSLFLSLTSGVSYQEDPGQSNDIRHAIVSYLLKRMGKIALQMEAVQMKIIFNCFSKISSQISRDDCLHYVPEILLPLYKVCEGFSGKVIPDDIKQLAEEVRETIKNTVGIQNFVQAYSEIRKNLKAKRDKRRQEEKVMAVVNPMRNAKRKLRIAAKHRANKKRKIMTMKMGRWVHQKQRTM